BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038G05LP1|AL430593
(790 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig567 1517 0.0
>3x_Contig567
Length = 1913
Score = 1517 bits (764), Expect = 0.0
Identities = 785/790 (99%), Gaps = 2/790 (0%)
Strand = Plus / Plus
Query: 1 aacttgctttttttattgatcacataattcaccctacagatactacttgcattaagatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 aacttgctttttttattgatcacataattcaccctacagatactacttgcattaagatct 873
Query: 61 aacctttcagtcgaccctagctaatcataatagagtcttcctcaaagggtttgaactact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874 aacctttcagtcgaccctagctaatcataatagagtcttcctcaaagggtttgaactact 933
Query: 121 agaaaaaaagcaaaatagttgggtgtgaaatgacgatttctttttacttcactactagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 934 agaaaaaaagcaaaatagttgggtgtgaaatgacgatttctttttacttcactactagat 993
Query: 181 gatgaactaggattcaagcaagcatgaggcatgagggaatgtcaaatgagactcaaaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 994 gatgaactaggattcaagcaagcatgaggcatgagggaatgtcaaatgagactcaaaata 1053
Query: 241 aaaattctcgaaacattttggtagtaaagtattctttaaacaagaaatttgattcgtcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1054 aaaattctcgaaacattttggtagtaaagtattctttaaacaagaaatttgattcgtcaa 1113
Query: 301 aggtctttgacagtacatgcatcagcttcttcccttgccatacagtaagtggctgaacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1114 aggtctttgacagtacatgcatcagcttcttcccttgccatacagtaagtggctgaacaa 1173
Query: 361 tggctgaaaaagactcataagaagttgaagacgaattattttttaagaagacatggacaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1174 tggctgaaaaagactcataagaagttgaagacgaattattttttaagaagacatggacaa 1233
Query: 421 ccgttatgctagataaaactaacaaatcgaattcgtaagasacattagccctgtgctttt 480
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1234 ccgttatgctagataaaactaacaaatcgaattcgtaagaaacattagccctgtgctttt 1293
Query: 481 ctgagatataagaagcacagcttcttacttctgaccatagttgtcattacgcatttcttt 540
|||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1294 ctgaaatataa-aagcacagcttcttacttctgacc-tagttgtcattacgcatttcttt 1351
Query: 541 ttttcacgtcttcttatatctattctggtcttaacaatacaaaatgctacaaattttgca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1352 ttttcacgtcttcttatatctattctggtcttaacaatacaaaatgctacaaattttgca 1411
Query: 601 aagcatgcataaaagagaaatatgaagaccctagtggtagggggttaccaaagcgtcaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1412 aagcatgcataaaagagaaatatgaagaccctagtggtagggggttaccaaagcgtcaaa 1471
Query: 661 attcatatagtggttctcgccggacattaatcatactatattcagattagttttgaagac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1472 attcatatagtggttctcgccggacattaatcatactatattcagattagttttgaagac 1531
Query: 721 agttctgatacattgccgattcaacaaacwatagtacttttcaaagtgattatttcaccg 780
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1532 agttctgatacattgccgattcaacaaactatagtacttttcaaagtgattatttcaccg 1591
Query: 781 aaatttttaa 790
||||||||||
Sbjct: 1592 aaatttttaa 1601
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6763
Number of Sequences: 1807
Number of extensions: 6763
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 790
length of database: 10,358,551
effective HSP length: 16
effective length of query: 774
effective length of database: 10,329,639
effective search space: 7995140586
effective search space used: 7995140586
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)